BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017G12SP1|AL427213
(924 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1211 1768 0.0
>3x_Contig1211
Length = 5913
Score = 1768 bits (891), Expect = 0.0
Identities = 919/923 (99%), Gaps = 4/923 (0%)
Strand = Plus / Minus
Query: 1 gatcggagacgaccctgtcacgtgaccgtcgcaatctcctaacggagaggataccctcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3977 gatcggagacgaccctgtcacgtgaccgtcgcaatctcctaacggagaggataccctcga 3918
Query: 61 tatcgcgcccg-ccacagccg-catcgtactttctactgaggtcaaaatcctgcaatgga 118
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3917 tatcgcgcccggccacagccggcatcgtactttctactgaggtcaaaatcctgcaatgga 3858
Query: 119 tcgtggtcatgcacggtttcaccctggtccacgtttcagattctcatcggaatcataaac 178
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3857 tcgtggtcatgcacggtttcaccctggtccacgtt-cagattctcatcggaatcataaac 3799
Query: 179 aaaatctggatccatcaatgccttcagtttaggatctattatcaacttgttcatatgaat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3798 aaaatctggatccatcaatgccttcagtttaggatctattatcaacttgttcatatgaat 3739
Query: 239 atctatctaagatttgtgtcggtataatatgaagcggaaaggaatatcaaaaaaaaaaaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3738 atctatctaagatttgtgtcggtataatatgaagcggaaaggaatatcaaaaaaaaaaaa 3679
Query: 299 tacctggtgggtgcacttggatgtatctcttcctaatgctgattattgaatggatgccta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3678 tacctggtgggtgcacttggatgtatctcttcctaatgctgattattgaatggatgccta 3619
Query: 359 gtcttctttagtgttgctattaagatggatttgaactctagctgcttatttgctattgac 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3618 gtcttctttagtgttgctattaagatggatttgaactctagctgcttatttgctattgac 3559
Query: 419 cattaacttatgtgcaagcataaaagatgaaagagccatgagagttcccgtaccagcatt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3558 cattaacttatgtgcaagcataaaagatgaaagagccatgagagttcccgtaccagcatt 3499
Query: 479 atatgtaacataattcatctgtttacatatctttggtgtcgtgaataatttctacatctg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3498 atatgtaacataattcatctgtttacatatctttggtgtcgtgaataatttctacatctg 3439
Query: 539 ctatttataacaagaaaggtgttcaatctgcaaacatgtaatgtctcaaaggttccaaaa 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3438 ctatttataacaagaaaggtgttcaatctgcaaacatgtaatgtctcaaaggttccaaaa 3379
Query: 599 ccccagaggaagacacatttttacattacacagaaaattgatatgatacttctttccttc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3378 ccccagaggaagacacatttttacattacacagaaaattgatatgatacttctttccttc 3319
Query: 659 ttgtttctgtttaattttgggtttttctgataatctgagtggaatagaatagagaaacta 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3318 ttgtttctgtttaattttgggtttttctgataatctgagtggaatagaatagagaaacta 3259
Query: 719 gtgcaggacacaagtcgaggcaaacgattgcagagtatacagtcaagtgcacattacaaa 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3258 gtgcaggacacaagtcgaggcaaacgattgcagagtatacagtcaagtgcacattacaaa 3199
Query: 779 tcacacattttgggagcgtgacggcgcagggcgtattgaatggggaacttcatcggaagg 838
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3198 tcacacatttt-ggagcgtgacggcgcagggcgtattgaatggggaacttcatcggaagg 3140
Query: 839 aagtttcatgcacgaaagaatgaaaaataaacattgaaatcgaagtacaactatcctatt 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3139 aagtttcatgcacgaaagaatgaaaaataaacattgaaatcgaagtacaactatcctatt 3080
Query: 899 gaccaaaaaaaaaaaaaaaaaaa 921
|||||||||||||||||||||||
Sbjct: 3079 gaccaaaaaaaaaaaaaaaaaaa 3057
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 26,461
Number of Sequences: 1807
Number of extensions: 26461
Number of successful extensions: 3740
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)